papers
publications in reverse chronological order.
2026
- The geometry of dominance shows broad potential for stable polymorphism under antagonistic pleiotropybioRxiv, 2026preprint
- An X-linked sex determination mechanism in cannabis and hopNature Communications, 2026
- Unraveling Cross-Cellular Communication in Cannabis sativa Sex Determination: A Network Ontology Transcript Annotation (Nota) AnalysisScientific Reports, 2026
- Genetic Associations with Dynamic Placental Proteins Identify Causal Biomarkers for Hypertension in PregnancyAmerican Journal of Obstetrics and Gynecology, 2026
- A Polygenic Growth Score and Risk for Large for Gestational Age Birth WeightJournal of the Endocrine Society, 2026
2025
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- Diabetes polygenic risk scores and maternal characteristics in Hoosier Moms Cohort participantsPregnancy, 2025
- Trophic level associated gut length divergence evolved under sexual conflict in Lake Malawi cichlidsGenetics, 2025
- Use of a Maternal Genetic Risk Score to Derive and Test a Genetically Customized Fetal Growth CurveO&G Open, 2025
- Mixed outcomes in recombination rates after domestication: revisiting theory and dataMolecular Ecology, 2025
2024
- CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methodsGenome Biology, 2024
- Evolutionary druggability: leveraging low-dimensional fitness landscapes towards new metrics for antimicrobial applicationseLife, 2024
- Early pregnancy associations with gestational diabetes: methods and cohort results of the Hoosier Moms CohortNorth American Proceedings in Gynecology and Obstetrics, 2024
- Genetic Polymorphisms Associated with Adverse Pregnancy Outcomes in NulliparasScientific Reports, 2024R.R. Khan and R.F. Guerrero contributed equally
- Integrating maternal genotypes to improve birth weight prediction in low-risk pregnanciesAmerican Journal of Obstetrics and Gynecology, 2024conference proceeding
2023
- Epistasis and pleiotropy shape biophysical protein subspaces associated with antimicrobial resistancePhysical Review E, 2023
- Searching and visualizing genetic associations of pregnancy traits by using GnuMoM2bGenetics, 2023
- Polygenic prediction of preeclampsia and gestational hypertensionNature Medicine, 2023
- The NLR Family of Disease Resistance Genes in Cultivated Watermelon and Other CucurbitsIn The Watermelon Genome, 2023
2022
- Association of Genetic Predisposition and Physical Activity With Risk of Gestational Diabetes in Nulliparous WomenJAMA Network Open, 2022
2021
- Inferring the genetic basis of sex determination from the genome of a dioecious nightshadeMolecular Biology and Evolution, 2021
2020
- The ortholog conjecture revisited: the value of orthologs and paralogs in function predictionBioinformatics, 2020
2019
- Proteostasis environment shapes higher-order epistasis operating on antibiotic resistanceGenetics, 2019
- CAGI SickKids challenges: Assessment of phenotype and variant predictions derived from clinical and genomic data of children with undiagnosed diseasesHuman Mutation, 2019includes R.F. Guerrero among 29 additional co-authors
2018
- Quantifying the risk of hemiplasy in phylogenetic inferenceProceedings of the National Academy of Sciences, 2018
- Complex selection on a regulator of social cognition: Evidence of balancing, epistatic, and spatially varying selection at the prairie vole Avpr1a locusMolecular Ecology, 2018
2017
- Speciation as a sieve for ancestral polymorphismMolecular Ecology, 2017
- Pervasive antagonistic interactions among hybrid incompatibility lociPLoS Genetics, 2017
- Topological features of gene regulatory networks predict patterns of natural diversity in environmental responseProceedings of the Royal Society B, 2017
- Transcriptomic analysis links gene expression to unilateral pollen-pistil reproductive barriersBMC Plant Biology, 2017A.K. Broz and R.F. Guerrero contributed equally
2016
- Genome-wide patterns of regulatory divergence revealed by introgression linesEvolution, 2016
- Transcriptome-wide analysis of gene expression changes that accompany post-mating prezygotic reproductive isolationMolecular Ecology, 2016
2014
- Local adaptation and the evolution of chromosome fusionsEvolution, 2014
- Signatures of sex-antagonistic selection on recombining sex chromosomesGenetics, 2014
- Strong reinforcement in a Texas wildflowerCurrent Biology, 2014
- Matrix inversions for chromosomal inversions: A method to construct summary statistics in complex coalescent modelsTheoretical Population Biology, 2014
2013
- A sequential coalescent algorithm for chromosomal inversionsHeredity, 2013
- Reproductive isolation and local adaptation quantified for a chromosome inversion in a malaria mosquitoEvolution, 2013D. Ayala, R.F. Guerrero, and M. Kirkpatrick contributed equally
2012
- Cryptic recombination in the ever-young sex chromosomes of European tree frogsJournal of Evolutionary Biology, 2012
- Flight morphology variation in a damselfly with female-limited polymorphismEvolutionary Ecology Research, 2012
- Coalescent patterns of chromosomal inversions in divergent populationsPhilosophical Transactions of the Royal Society B, 2012
2011
- About PAR: The distinct evolutionary dynamics of the pseudoautosomal regionTrends in Genetics, 2011
2010
- Patterns of neutral genetic variation on recombining sex chromosomesGenetics, 2010